Cluster: HRGMv2_1951_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1951
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1951_48 | HRGMv2_1951_48_3 | 2163 | 3251 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1951_48 | HRGMv2_1951_48_4 | 3321 | 4628 | + | Mur_ligase_M |
| CAZyme | HRGMv2_1951_48 | HRGMv2_1951_48_5 | 4625 | 5701 | + | GT28 |
Gene ID: HRGMv2_1951_48_3
Type: TC
Location: 2163 - 3251 (+)
Type: TC
Location: 2163 - 3251 (+)
Gene ID: HRGMv2_1951_48_4
Type: pfam
Location: 3321 - 4628 (+)
Type: pfam
Location: 3321 - 4628 (+)
Gene ID: HRGMv2_1951_48_5
Type: CAZyme
Location: 4625 - 5701 (+)
Type: CAZyme
Location: 4625 - 5701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.