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Cluster: HRGMv2_1951_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1951_225 HRGMv2_1951_225_1 2 1090 - GT83
pfam HRGMv2_1951_225 HRGMv2_1951_225_2 1141 1953 - S6PP | Hydrolase_3
TC HRGMv2_1951_225 HRGMv2_1951_225_3 2001 3494 - 2.A.1.3.2
TC HRGMv2_1951_225 HRGMv2_1951_225_4 3505 4725 - 8.A.1.1.1
TC HRGMv2_1951_225 HRGMv2_1951_225_5 4740 6161 - 2.A.6.2.22
pfam HRGMv2_1951_225 HRGMv2_1951_225_6 6651 7016 + FadA
NULL(UNKNOWN) HRGMv2_1951_225 HRGMv2_1951_225_7 7035 7241 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1951_225 HRGMv2_1951_225_8 7291 8643 - 2.A.66.1.28
TC HRGMv2_1951_225 HRGMv2_1951_225_9 8960 9988 + 3.A.15.2.1
Gene ID: HRGMv2_1951_225_1
Type: CAZyme
Location: 2 - 1090 (-)
Gene ID: HRGMv2_1951_225_2
Type: pfam
Location: 1141 - 1953 (-)
Gene ID: HRGMv2_1951_225_3
Type: TC
Location: 2001 - 3494 (-)
Gene ID: HRGMv2_1951_225_4
Type: TC
Location: 3505 - 4725 (-)
Gene ID: HRGMv2_1951_225_5
Type: TC
Location: 4740 - 6161 (-)
Gene ID: HRGMv2_1951_225_6
Type: pfam
Location: 6651 - 7016 (+)
Gene ID: HRGMv2_1951_225_7
Type:
Location: 7035 - 7241 (+)
Gene ID: HRGMv2_1951_225_8
Type: TC
Location: 7291 - 8643 (-)
Gene ID: HRGMv2_1951_225_9
Type: TC
Location: 8960 - 9988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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