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Cluster: HRGMv2_1951_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1951_196 HRGMv2_1951_196_2 290 1546 + 9.B.18.1.3
CAZyme HRGMv2_1951_196 HRGMv2_1951_196_3 1548 2333 + GT2
CAZyme HRGMv2_1951_196 HRGMv2_1951_196_4 2330 3418 + GT4
pfam HRGMv2_1951_196 HRGMv2_1951_196_5 3420 4619 + EpsG
CAZyme HRGMv2_1951_196 HRGMv2_1951_196_6 4640 5749 + GT4
CAZyme HRGMv2_1951_196 HRGMv2_1951_196_7 5762 6751 + GT2
CAZyme HRGMv2_1951_196 HRGMv2_1951_196_8 6768 7556 + GT32
Gene ID: HRGMv2_1951_196_2
Type: TC
Location: 290 - 1546 (+)
Gene ID: HRGMv2_1951_196_3
Type: CAZyme
Location: 1548 - 2333 (+)
Gene ID: HRGMv2_1951_196_4
Type: CAZyme
Location: 2330 - 3418 (+)
Gene ID: HRGMv2_1951_196_5
Type: pfam
Location: 3420 - 4619 (+)
Gene ID: HRGMv2_1951_196_6
Type: CAZyme
Location: 4640 - 5749 (+)
Gene ID: HRGMv2_1951_196_7
Type: CAZyme
Location: 5762 - 6751 (+)
Gene ID: HRGMv2_1951_196_8
Type: CAZyme
Location: 6768 - 7556 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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