Cluster: HRGMv2_1949_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1949_16 | HRGMv2_1949_16_25 | 13047 | 14393 | + | 1.A.26.1.2 |
| TF | HRGMv2_1949_16 | HRGMv2_1949_16_26 | 14683 | 15699 | + | LacI |
| CAZyme | HRGMv2_1949_16 | HRGMv2_1949_16_27 | 16035 | 17981 | - | GH164 | GH42 |
| TC | HRGMv2_1949_16 | HRGMv2_1949_16_28 | 18000 | 19352 | - | 2.A.2.1.1 |
| CAZyme | HRGMv2_1949_16 | HRGMv2_1949_16_29 | 19373 | 21568 | - | GH36 |
| STP | HRGMv2_1949_16 | HRGMv2_1949_16_30 | 21859 | 23682 | + | HATPase_c |
| TC | HRGMv2_1949_16 | HRGMv2_1949_16_31 | 23917 | 24975 | + | 3.A.1.5.11 |
Gene ID: HRGMv2_1949_16_25
Type: TC
Location: 13047 - 14393 (+)
Type: TC
Location: 13047 - 14393 (+)
Gene ID: HRGMv2_1949_16_26
Type: TF
Location: 14683 - 15699 (+)
Type: TF
Location: 14683 - 15699 (+)
Gene ID: HRGMv2_1949_16_27
Type: CAZyme
Location: 16035 - 17981 (-)
Type: CAZyme
Location: 16035 - 17981 (-)
Gene ID: HRGMv2_1949_16_28
Type: TC
Location: 18000 - 19352 (-)
Type: TC
Location: 18000 - 19352 (-)
Gene ID: HRGMv2_1949_16_29
Type: CAZyme
Location: 19373 - 21568 (-)
Type: CAZyme
Location: 19373 - 21568 (-)
Gene ID: HRGMv2_1949_16_30
Type: STP
Location: 21859 - 23682 (+)
Type: STP
Location: 21859 - 23682 (+)
Gene ID: HRGMv2_1949_16_31
Type: TC
Location: 23917 - 24975 (+)
Type: TC
Location: 23917 - 24975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.