Cluster: HRGMv2_1949_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_06445
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1949_133 | HRGMv2_1949_133_2 | 413 | 1741 | - | 2.A.66.1.18 |
| TC | HRGMv2_1949_133 | HRGMv2_1949_133_3 | 1987 | 3264 | + | 3.A.1.1.11 |
| TC | HRGMv2_1949_133 | HRGMv2_1949_133_4 | 3299 | 4591 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_1949_133 | HRGMv2_1949_133_5 | 4603 | 6195 | + | PL2_2 |
Gene ID: HRGMv2_1949_133_2
Type: TC
Location: 413 - 1741 (-)
Type: TC
Location: 413 - 1741 (-)
Gene ID: HRGMv2_1949_133_3
Type: TC
Location: 1987 - 3264 (+)
Type: TC
Location: 1987 - 3264 (+)
Gene ID: HRGMv2_1949_133_4
Type: TC
Location: 3299 - 4591 (+)
Type: TC
Location: 3299 - 4591 (+)
Gene ID: HRGMv2_1949_133_5
Type: CAZyme
Location: 4603 - 6195 (+)
Type: CAZyme
Location: 4603 - 6195 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.