Cluster: HRGMv2_1949_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_07775
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1949_1 | HRGMv2_1949_1_43 | 51805 | 52803 | - | CBM50 |
| TC | HRGMv2_1949_1 | HRGMv2_1949_1_44 | 52793 | 54040 | - | 3.A.6.1.1 |
| pfam | HRGMv2_1949_1 | HRGMv2_1949_1_45 | 54065 | 55375 | - | UPF0004 | TRAM | Radical_SAM | TRAM_2 |
| TF | HRGMv2_1949_1 | HRGMv2_1949_1_46 | 55548 | 56309 | - | HTH_DeoR |
| TC | HRGMv2_1949_1 | HRGMv2_1949_1_47 | 56303 | 57664 | - | 2.A.25.1.4 |
| pfam | HRGMv2_1949_1 | HRGMv2_1949_1_48 | 57744 | 58793 | - | AP_endonuc_2 |
| TC | HRGMv2_1949_1 | HRGMv2_1949_1_49 | 58806 | 60068 | - | 2.A.1.52.1 |
Gene ID: HRGMv2_1949_1_43
Type: CAZyme
Location: 51805 - 52803 (-)
Type: CAZyme
Location: 51805 - 52803 (-)
Gene ID: HRGMv2_1949_1_44
Type: TC
Location: 52793 - 54040 (-)
Type: TC
Location: 52793 - 54040 (-)
Gene ID: HRGMv2_1949_1_45
Type: pfam
Location: 54065 - 55375 (-)
Type: pfam
Location: 54065 - 55375 (-)
Gene ID: HRGMv2_1949_1_46
Type: TF
Location: 55548 - 56309 (-)
Type: TF
Location: 55548 - 56309 (-)
Gene ID: HRGMv2_1949_1_47
Type: TC
Location: 56303 - 57664 (-)
Type: TC
Location: 56303 - 57664 (-)
Gene ID: HRGMv2_1949_1_48
Type: pfam
Location: 57744 - 58793 (-)
Type: pfam
Location: 57744 - 58793 (-)
Gene ID: HRGMv2_1949_1_49
Type: TC
Location: 58806 - 60068 (-)
Type: TC
Location: 58806 - 60068 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.