Cluster: HRGMv2_1949_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1949_67 | HRGMv2_1949_67_2 | 801 | 1934 | - | GT4 |
| pfam | HRGMv2_1949_67 | HRGMv2_1949_67_3 | 1931 | 2794 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | HRGMv2_1949_67 | HRGMv2_1949_67_4 | 2794 | 3474 | - | 9.B.18.1.2 |
| pfam | HRGMv2_1949_67 | HRGMv2_1949_67_5 | 3489 | 4007 | - | PglD_N |
| TC | HRGMv2_1949_67 | HRGMv2_1949_67_6 | 4007 | 6148 | - | 9.B.18.2.1 |
| pfam | HRGMv2_1949_67 | HRGMv2_1949_67_7 | 6481 | 7509 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_1949_67 | HRGMv2_1949_67_8 | 7915 | 9990 | + | GH33 |
Gene ID: HRGMv2_1949_67_2
Type: CAZyme
Location: 801 - 1934 (-)
Type: CAZyme
Location: 801 - 1934 (-)
Gene ID: HRGMv2_1949_67_3
Type: pfam
Location: 1931 - 2794 (-)
Type: pfam
Location: 1931 - 2794 (-)
Gene ID: HRGMv2_1949_67_4
Type: TC
Location: 2794 - 3474 (-)
Type: TC
Location: 2794 - 3474 (-)
Gene ID: HRGMv2_1949_67_5
Type: pfam
Location: 3489 - 4007 (-)
Type: pfam
Location: 3489 - 4007 (-)
Gene ID: HRGMv2_1949_67_6
Type: TC
Location: 4007 - 6148 (-)
Type: TC
Location: 4007 - 6148 (-)
Gene ID: HRGMv2_1949_67_7
Type: pfam
Location: 6481 - 7509 (-)
Type: pfam
Location: 6481 - 7509 (-)
Gene ID: HRGMv2_1949_67_8
Type: CAZyme
Location: 7915 - 9990 (+)
Type: CAZyme
Location: 7915 - 9990 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.