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Cluster: HRGMv2_1949_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1949_63 HRGMv2_1949_63_2 214 1221 - GT2
pfam HRGMv2_1949_63 HRGMv2_1949_63_3 1222 2424 - Wzy_C
CAZyme HRGMv2_1949_63 HRGMv2_1949_63_4 2414 3481 - GT9
pfam HRGMv2_1949_63 HRGMv2_1949_63_5 3493 4245 - WaaY
CAZyme HRGMv2_1949_63 HRGMv2_1949_63_6 4258 5448 - GT4
CAZyme HRGMv2_1949_63 HRGMv2_1949_63_7 5445 6635 - GT4
CAZyme HRGMv2_1949_63 HRGMv2_1949_63_8 6647 7747 - GT9
pfam HRGMv2_1949_63 HRGMv2_1949_63_9 7906 8784 + DAGK_cat | YegS_C
TC HRGMv2_1949_63 HRGMv2_1949_63_10 9141 10334 + 2.A.27.1.1
Gene ID: HRGMv2_1949_63_2
Type: CAZyme
Location: 214 - 1221 (-)
Gene ID: HRGMv2_1949_63_3
Type: pfam
Location: 1222 - 2424 (-)
Gene ID: HRGMv2_1949_63_4
Type: CAZyme
Location: 2414 - 3481 (-)
Gene ID: HRGMv2_1949_63_5
Type: pfam
Location: 3493 - 4245 (-)
Gene ID: HRGMv2_1949_63_6
Type: CAZyme
Location: 4258 - 5448 (-)
Gene ID: HRGMv2_1949_63_7
Type: CAZyme
Location: 5445 - 6635 (-)
Gene ID: HRGMv2_1949_63_8
Type: CAZyme
Location: 6647 - 7747 (-)
Gene ID: HRGMv2_1949_63_9
Type: pfam
Location: 7906 - 8784 (+)
Gene ID: HRGMv2_1949_63_10
Type: TC
Location: 9141 - 10334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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