Cluster: HRGMv2_1949_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_00230
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1949_49 | HRGMv2_1949_49_2 | 838 | 2457 | - | 4.A.1.1.3 |
| CAZyme | HRGMv2_1949_49 | HRGMv2_1949_49_3 | 2477 | 5038 | - | GH38 |
| TF | HRGMv2_1949_49 | HRGMv2_1949_49_4 | 5137 | 5853 | - | HTH_6 |
| CAZyme | HRGMv2_1949_49 | HRGMv2_1949_49_5 | 5884 | 7209 | - | GH4 |
| TF | HRGMv2_1949_49 | HRGMv2_1949_49_6 | 7338 | 8423 | + | 0037176 |
| TC | HRGMv2_1949_49 | HRGMv2_1949_49_7 | 8563 | 9819 | + | 2.A.8.1.9 |
Gene ID: HRGMv2_1949_49_2
Type: TC
Location: 838 - 2457 (-)
Type: TC
Location: 838 - 2457 (-)
Gene ID: HRGMv2_1949_49_3
Type: CAZyme
Location: 2477 - 5038 (-)
Type: CAZyme
Location: 2477 - 5038 (-)
Gene ID: HRGMv2_1949_49_4
Type: TF
Location: 5137 - 5853 (-)
Type: TF
Location: 5137 - 5853 (-)
Gene ID: HRGMv2_1949_49_5
Type: CAZyme
Location: 5884 - 7209 (-)
Type: CAZyme
Location: 5884 - 7209 (-)
Gene ID: HRGMv2_1949_49_6
Type: TF
Location: 7338 - 8423 (+)
Type: TF
Location: 7338 - 8423 (+)
Gene ID: HRGMv2_1949_49_7
Type: TC
Location: 8563 - 9819 (+)
Type: TC
Location: 8563 - 9819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.