Cluster: HRGMv2_1949_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1949_41 | HRGMv2_1949_41_9 | 8486 | 9472 | - | GT2 |
| pfam | HRGMv2_1949_41 | HRGMv2_1949_41_10 | 9462 | 10298 | - | Epimerase | RmlD_sub_bind |
| pfam | HRGMv2_1949_41 | HRGMv2_1949_41_11 | 10291 | 11424 | - | Epimerase_2 |
| TC | HRGMv2_1949_41 | HRGMv2_1949_41_12 | 11425 | 12462 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_1949_41 | HRGMv2_1949_41_13 | 12475 | 13674 | - | GT4 |
| TC | HRGMv2_1949_41 | HRGMv2_1949_41_14 | 13675 | 15003 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_1949_41_9
Type: CAZyme
Location: 8486 - 9472 (-)
Type: CAZyme
Location: 8486 - 9472 (-)
Gene ID: HRGMv2_1949_41_10
Type: pfam
Location: 9462 - 10298 (-)
Type: pfam
Location: 9462 - 10298 (-)
Gene ID: HRGMv2_1949_41_11
Type: pfam
Location: 10291 - 11424 (-)
Type: pfam
Location: 10291 - 11424 (-)
Gene ID: HRGMv2_1949_41_12
Type: TC
Location: 11425 - 12462 (-)
Type: TC
Location: 11425 - 12462 (-)
Gene ID: HRGMv2_1949_41_13
Type: CAZyme
Location: 12475 - 13674 (-)
Type: CAZyme
Location: 12475 - 13674 (-)
Gene ID: HRGMv2_1949_41_14
Type: TC
Location: 13675 - 15003 (-)
Type: TC
Location: 13675 - 15003 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.