Cluster: HRGMv2_1949_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1949
- CGC Family ID: CGCFAM_01185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1949_32 | HRGMv2_1949_32_1 | 2 | 502 | - | 3.A.1.1.10 |
| sulfatase | HRGMv2_1949_32 | HRGMv2_1949_32_2 | 1006 | 2415 | + | S1_27 |
| CAZyme | HRGMv2_1949_32 | HRGMv2_1949_32_3 | 2437 | 3627 | + | GH88 |
| TC | HRGMv2_1949_32 | HRGMv2_1949_32_4 | 3668 | 5083 | + | 2.A.2.3.2 |
| pfam | HRGMv2_1949_32 | HRGMv2_1949_32_5 | 5099 | 5737 | + | LUD_dom |
| pfam | HRGMv2_1949_32 | HRGMv2_1949_32_6 | 5737 | 6318 | + | LUD_dom |
| CAZyme | HRGMv2_1949_32 | HRGMv2_1949_32_7 | 6363 | 8252 | - | PL12_1 |
Gene ID: HRGMv2_1949_32_1
Type: TC
Location: 2 - 502 (-)
Type: TC
Location: 2 - 502 (-)
Gene ID: HRGMv2_1949_32_2
Type: sulfatase
Location: 1006 - 2415 (+)
Type: sulfatase
Location: 1006 - 2415 (+)
Gene ID: HRGMv2_1949_32_3
Type: CAZyme
Location: 2437 - 3627 (+)
Type: CAZyme
Location: 2437 - 3627 (+)
Gene ID: HRGMv2_1949_32_4
Type: TC
Location: 3668 - 5083 (+)
Type: TC
Location: 3668 - 5083 (+)
Gene ID: HRGMv2_1949_32_5
Type: pfam
Location: 5099 - 5737 (+)
Type: pfam
Location: 5099 - 5737 (+)
Gene ID: HRGMv2_1949_32_6
Type: pfam
Location: 5737 - 6318 (+)
Type: pfam
Location: 5737 - 6318 (+)
Gene ID: HRGMv2_1949_32_7
Type: CAZyme
Location: 6363 - 8252 (-)
Type: CAZyme
Location: 6363 - 8252 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A mortiferum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.