Cluster: HRGMv2_1948_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1948
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1948_4 | HRGMv2_1948_4_159 | 152146 | 153375 | + | GT30 |
| pfam | HRGMv2_1948_4 | HRGMv2_1948_4_160 | 153351 | 154055 | + | Methyltransf_4 |
| pfam | HRGMv2_1948_4 | HRGMv2_1948_4_161 | 154067 | 155344 | + | Adenylsucc_synt |
| TC | HRGMv2_1948_4 | HRGMv2_1948_4_162 | 155431 | 156009 | + | 2.A.51.1.6 |
| TC | HRGMv2_1948_4 | HRGMv2_1948_4_163 | 156006 | 156566 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_1948_4_159
Type: CAZyme
Location: 152146 - 153375 (+)
Type: CAZyme
Location: 152146 - 153375 (+)
Gene ID: HRGMv2_1948_4_160
Type: pfam
Location: 153351 - 154055 (+)
Type: pfam
Location: 153351 - 154055 (+)
Gene ID: HRGMv2_1948_4_161
Type: pfam
Location: 154067 - 155344 (+)
Type: pfam
Location: 154067 - 155344 (+)
Gene ID: HRGMv2_1948_4_162
Type: TC
Location: 155431 - 156009 (+)
Type: TC
Location: 155431 - 156009 (+)
Gene ID: HRGMv2_1948_4_163
Type: TC
Location: 156006 - 156566 (+)
Type: TC
Location: 156006 - 156566 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_C
Species
Fusobacterium_C necrophorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.