Cluster: HRGMv2_1945_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1945
- CGC Family ID: CGCFAM_01065
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1945_5 | HRGMv2_1945_5_20 | 28661 | 31702 | + | GH3 |
| TC | HRGMv2_1945_5 | HRGMv2_1945_5_21 | 31954 | 33732 | - | 2.A.53.3.9 |
| pfam | HRGMv2_1945_5 | HRGMv2_1945_5_22 | 34036 | 34968 | + | Exo_endo_phos |
| TC | HRGMv2_1945_5 | HRGMv2_1945_5_23 | 35081 | 38209 | - | 2.A.6.4.3 |
Gene ID: HRGMv2_1945_5_20
Type: CAZyme
Location: 28661 - 31702 (+)
Type: CAZyme
Location: 28661 - 31702 (+)
Gene ID: HRGMv2_1945_5_21
Type: TC
Location: 31954 - 33732 (-)
Type: TC
Location: 31954 - 33732 (-)
Gene ID: HRGMv2_1945_5_22
Type: pfam
Location: 34036 - 34968 (+)
Type: pfam
Location: 34036 - 34968 (+)
Gene ID: HRGMv2_1945_5_23
Type: TC
Location: 35081 - 38209 (-)
Type: TC
Location: 35081 - 38209 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.