Cluster: HRGMv2_1945_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1945
- CGC Family ID: CGCFAM_02812
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1945_35 | HRGMv2_1945_35_7 | 8341 | 9687 | + | 9.A.40.1.2 |
| STP | HRGMv2_1945_35 | HRGMv2_1945_35_8 | 9861 | 11255 | + | TPR_1 | TPR_2 |
| CAZyme | HRGMv2_1945_35 | HRGMv2_1945_35_9 | 11268 | 13817 | + | GH20 |
Gene ID: HRGMv2_1945_35_7
Type: TC
Location: 8341 - 9687 (+)
Type: TC
Location: 8341 - 9687 (+)
Gene ID: HRGMv2_1945_35_8
Type: STP
Location: 9861 - 11255 (+)
Type: STP
Location: 9861 - 11255 (+)
Gene ID: HRGMv2_1945_35_9
Type: CAZyme
Location: 11268 - 13817 (+)
Type: CAZyme
Location: 11268 - 13817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1945_35_9 | vegetarian > vegan | 1.25180 | 0.02242 |