Cluster: HRGMv2_1944_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1944
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1944_3 | HRGMv2_1944_3_37 | 48783 | 50348 | - | 9.B.157.1.3 |
| NULL(UNKNOWN) | HRGMv2_1944_3 | HRGMv2_1944_3_38 | 50364 | 51098 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1944_3 | HRGMv2_1944_3_39 | 51121 | 52269 | - | GT28 |
| TC | HRGMv2_1944_3 | HRGMv2_1944_3_40 | 52266 | 53621 | - | 2.A.103.1.4 |
| TC | HRGMv2_1944_3 | HRGMv2_1944_3_41 | 53640 | 54893 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_1944_3_37
Type: TC
Location: 48783 - 50348 (-)
Type: TC
Location: 48783 - 50348 (-)
Gene ID: HRGMv2_1944_3_38
Type:
Location: 50364 - 51098 (-)
Type:
Location: 50364 - 51098 (-)
Gene ID: HRGMv2_1944_3_39
Type: CAZyme
Location: 51121 - 52269 (-)
Type: CAZyme
Location: 51121 - 52269 (-)
Gene ID: HRGMv2_1944_3_40
Type: TC
Location: 52266 - 53621 (-)
Type: TC
Location: 52266 - 53621 (-)
Gene ID: HRGMv2_1944_3_41
Type: TC
Location: 53640 - 54893 (-)
Type: TC
Location: 53640 - 54893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha sp902478645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1944_3_38 | vegetarian > vegan | 1.46756 | 0.04322 |