Cluster: HRGMv2_1944_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1944
- CGC Family ID: CGCFAM_06078
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1944_2 | HRGMv2_1944_2_22 | 23204 | 24121 | + | 2.A.4.1.3 |
| NULL(UNKNOWN) | HRGMv2_1944_2 | HRGMv2_1944_2_23 | 24138 | 24647 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1944_2 | HRGMv2_1944_2_24 | 24772 | 25503 | - | SIMPL |
| TC | HRGMv2_1944_2 | HRGMv2_1944_2_25 | 25578 | 27485 | - | 3.A.11.1.1 |
| CAZyme | HRGMv2_1944_2 | HRGMv2_1944_2_26 | 27552 | 28691 | - | GT19 |
Gene ID: HRGMv2_1944_2_22
Type: TC
Location: 23204 - 24121 (+)
Type: TC
Location: 23204 - 24121 (+)
Gene ID: HRGMv2_1944_2_23
Type:
Location: 24138 - 24647 (+)
Type:
Location: 24138 - 24647 (+)
Gene ID: HRGMv2_1944_2_24
Type: pfam
Location: 24772 - 25503 (-)
Type: pfam
Location: 24772 - 25503 (-)
Gene ID: HRGMv2_1944_2_25
Type: TC
Location: 25578 - 27485 (-)
Type: TC
Location: 25578 - 27485 (-)
Gene ID: HRGMv2_1944_2_26
Type: CAZyme
Location: 27552 - 28691 (-)
Type: CAZyme
Location: 27552 - 28691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha sp902478645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1944_2_25 | vegetarian > vegan | 1.03641 | 0.04322 |