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Cluster: HRGMv2_1939_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1939_6 HRGMv2_1939_6_93 93558 94262 - 3.A.1.4.10
TC HRGMv2_1939_6 HRGMv2_1939_6_94 94273 95031 - 3.A.1.4.10
TC HRGMv2_1939_6 HRGMv2_1939_6_95 95031 96038 - 3.A.1.4.10
TC HRGMv2_1939_6 HRGMv2_1939_6_96 96042 96917 - 3.A.1.4.10
TC HRGMv2_1939_6 HRGMv2_1939_6_97 97027 98193 - 3.A.1.4.10
STP HRGMv2_1939_6 HRGMv2_1939_6_98 98292 98933 - HhH-GPD
pfam HRGMv2_1939_6 HRGMv2_1939_6_99 98926 99288 - Cupin_1 | MannoseP_isomer | Cupin_3 | Cupin_2
CAZyme HRGMv2_1939_6 HRGMv2_1939_6_100 99302 101464 - GT51
Gene ID: HRGMv2_1939_6_93
Type: TC
Location: 93558 - 94262 (-)
Gene ID: HRGMv2_1939_6_94
Type: TC
Location: 94273 - 95031 (-)
Gene ID: HRGMv2_1939_6_95
Type: TC
Location: 95031 - 96038 (-)
Gene ID: HRGMv2_1939_6_96
Type: TC
Location: 96042 - 96917 (-)
Gene ID: HRGMv2_1939_6_97
Type: TC
Location: 97027 - 98193 (-)
Gene ID: HRGMv2_1939_6_98
Type: STP
Location: 98292 - 98933 (-)
Gene ID: HRGMv2_1939_6_99
Type: pfam
Location: 98926 - 99288 (-)
Gene ID: HRGMv2_1939_6_100
Type: CAZyme
Location: 99302 - 101464 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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