Cluster: HRGMv2_1939_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1939_5 | HRGMv2_1939_5_72 | 62876 | 63631 | - | 3.A.1.20.2 |
| pfam | HRGMv2_1939_5 | HRGMv2_1939_5_73 | 63847 | 65481 | + | PTPS_related |
| CAZyme | HRGMv2_1939_5 | HRGMv2_1939_5_74 | 65453 | 67264 | + | GT39 |
| pfam | HRGMv2_1939_5 | HRGMv2_1939_5_75 | 67318 | 67869 | + | PsiE |
| pfam | HRGMv2_1939_5 | HRGMv2_1939_5_76 | 67844 | 68218 | + | Ribonuc_L-PSP |
| TC | HRGMv2_1939_5 | HRGMv2_1939_5_77 | 68281 | 69219 | + | 2.A.4.7.4 |
Gene ID: HRGMv2_1939_5_72
Type: TC
Location: 62876 - 63631 (-)
Type: TC
Location: 62876 - 63631 (-)
Gene ID: HRGMv2_1939_5_73
Type: pfam
Location: 63847 - 65481 (+)
Type: pfam
Location: 63847 - 65481 (+)
Gene ID: HRGMv2_1939_5_74
Type: CAZyme
Location: 65453 - 67264 (+)
Type: CAZyme
Location: 65453 - 67264 (+)
Gene ID: HRGMv2_1939_5_75
Type: pfam
Location: 67318 - 67869 (+)
Type: pfam
Location: 67318 - 67869 (+)
Gene ID: HRGMv2_1939_5_76
Type: pfam
Location: 67844 - 68218 (+)
Type: pfam
Location: 67844 - 68218 (+)
Gene ID: HRGMv2_1939_5_77
Type: TC
Location: 68281 - 69219 (+)
Type: TC
Location: 68281 - 69219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.