Cluster: HRGMv2_1939_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1939
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1939_15 | HRGMv2_1939_15_7 | 6488 | 7579 | - | GT4 |
| CAZyme | HRGMv2_1939_15 | HRGMv2_1939_15_8 | 7597 | 8463 | - | GT2 |
| pfam | HRGMv2_1939_15 | HRGMv2_1939_15_9 | 8468 | 9334 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_1939_15 | HRGMv2_1939_15_10 | 9331 | 9951 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_1939_15_7
Type: CAZyme
Location: 6488 - 7579 (-)
Type: CAZyme
Location: 6488 - 7579 (-)
Gene ID: HRGMv2_1939_15_8
Type: CAZyme
Location: 7597 - 8463 (-)
Type: CAZyme
Location: 7597 - 8463 (-)
Gene ID: HRGMv2_1939_15_9
Type: pfam
Location: 8468 - 9334 (-)
Type: pfam
Location: 8468 - 9334 (-)
Gene ID: HRGMv2_1939_15_10
Type: TC
Location: 9331 - 9951 (-)
Type: TC
Location: 9331 - 9951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.