Cluster: HRGMv2_1939_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1939_13 | HRGMv2_1939_13_113 | 130638 | 133259 | - | GH3 |
| pfam | HRGMv2_1939_13 | HRGMv2_1939_13_114 | 133279 | 134088 | - | NAD_binding_2 | F420_oxidored | P5CR_dimer |
| TC | HRGMv2_1939_13 | HRGMv2_1939_13_115 | 134267 | 135010 | + | 3.A.1.134.12 |
| TC | HRGMv2_1939_13 | HRGMv2_1939_13_116 | 135020 | 136981 | + | 3.A.1.134.12 |
Gene ID: HRGMv2_1939_13_113
Type: CAZyme
Location: 130638 - 133259 (-)
Type: CAZyme
Location: 130638 - 133259 (-)
Gene ID: HRGMv2_1939_13_114
Type: pfam
Location: 133279 - 134088 (-)
Type: pfam
Location: 133279 - 134088 (-)
Gene ID: HRGMv2_1939_13_115
Type: TC
Location: 134267 - 135010 (+)
Type: TC
Location: 134267 - 135010 (+)
Gene ID: HRGMv2_1939_13_116
Type: TC
Location: 135020 - 136981 (+)
Type: TC
Location: 135020 - 136981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.