Cluster: HRGMv2_1939_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1939_2 | HRGMv2_1939_2_223 | 231936 | 233426 | - | 3.A.1.121.3 |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_224 | 233850 | 234656 | - | Amidohydro_2 |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_225 | 234808 | 236025 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_1939_2 | HRGMv2_1939_2_226 | 236154 | 237308 | + | 2.A.103.1.2 |
| NULL(UNKNOWN) | HRGMv2_1939_2 | HRGMv2_1939_2_227 | 237324 | 238451 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1939_2 | HRGMv2_1939_2_228 | 238448 | 239857 | - | AA4 |
Gene ID: HRGMv2_1939_2_223
Type: TC
Location: 231936 - 233426 (-)
Type: TC
Location: 231936 - 233426 (-)
Gene ID: HRGMv2_1939_2_224
Type: pfam
Location: 233850 - 234656 (-)
Type: pfam
Location: 233850 - 234656 (-)
Gene ID: HRGMv2_1939_2_225
Type: pfam
Location: 234808 - 236025 (+)
Type: pfam
Location: 234808 - 236025 (+)
Gene ID: HRGMv2_1939_2_226
Type: TC
Location: 236154 - 237308 (+)
Type: TC
Location: 236154 - 237308 (+)
Gene ID: HRGMv2_1939_2_227
Type:
Location: 237324 - 238451 (-)
Type:
Location: 237324 - 238451 (-)
Gene ID: HRGMv2_1939_2_228
Type: CAZyme
Location: 238448 - 239857 (-)
Type: CAZyme
Location: 238448 - 239857 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.