Cluster: HRGMv2_1939_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1939_11 | HRGMv2_1939_11_110 | 117026 | 118132 | - | GT28 |
| TC | HRGMv2_1939_11 | HRGMv2_1939_11_111 | 118129 | 119244 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1939_11 | HRGMv2_1939_11_112 | 119244 | 120620 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1939_11 | HRGMv2_1939_11_113 | 120641 | 121606 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1939_11_110
Type: CAZyme
Location: 117026 - 118132 (-)
Type: CAZyme
Location: 117026 - 118132 (-)
Gene ID: HRGMv2_1939_11_111
Type: TC
Location: 118129 - 119244 (-)
Type: TC
Location: 118129 - 119244 (-)
Gene ID: HRGMv2_1939_11_112
Type: pfam
Location: 119244 - 120620 (-)
Type: pfam
Location: 119244 - 120620 (-)
Gene ID: HRGMv2_1939_11_113
Type: TC
Location: 120641 - 121606 (-)
Type: TC
Location: 120641 - 121606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.