Cluster: HRGMv2_1939_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1939
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1939_7 | HRGMv2_1939_7_59 | 57290 | 58378 | - | GT4 |
| pfam | HRGMv2_1939_7 | HRGMv2_1939_7_60 | 58378 | 59505 | - | Epimerase_2 |
| pfam | HRGMv2_1939_7 | HRGMv2_1939_7_61 | 59462 | 60658 | - | Epimerase | NAD_binding_4 | Polysacc_synt_C |
| TC | HRGMv2_1939_7 | HRGMv2_1939_7_62 | 60669 | 61712 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_1939_7 | HRGMv2_1939_7_63 | 61721 | 62917 | - | GT4 |
| TC | HRGMv2_1939_7 | HRGMv2_1939_7_64 | 62914 | 63570 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_1939_7_59
Type: CAZyme
Location: 57290 - 58378 (-)
Type: CAZyme
Location: 57290 - 58378 (-)
Gene ID: HRGMv2_1939_7_60
Type: pfam
Location: 58378 - 59505 (-)
Type: pfam
Location: 58378 - 59505 (-)
Gene ID: HRGMv2_1939_7_61
Type: pfam
Location: 59462 - 60658 (-)
Type: pfam
Location: 59462 - 60658 (-)
Gene ID: HRGMv2_1939_7_62
Type: TC
Location: 60669 - 61712 (-)
Type: TC
Location: 60669 - 61712 (-)
Gene ID: HRGMv2_1939_7_63
Type: CAZyme
Location: 61721 - 62917 (-)
Type: CAZyme
Location: 61721 - 62917 (-)
Gene ID: HRGMv2_1939_7_64
Type: TC
Location: 62914 - 63570 (-)
Type: TC
Location: 62914 - 63570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.