Cluster: HRGMv2_1937_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1937_2 | HRGMv2_1937_2_112 | 121344 | 122450 | - | GT28 |
| TC | HRGMv2_1937_2 | HRGMv2_1937_2_113 | 122447 | 123562 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1937_2 | HRGMv2_1937_2_114 | 123562 | 124938 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1937_2 | HRGMv2_1937_2_115 | 124959 | 125924 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1937_2_112
Type: CAZyme
Location: 121344 - 122450 (-)
Type: CAZyme
Location: 121344 - 122450 (-)
Gene ID: HRGMv2_1937_2_113
Type: TC
Location: 122447 - 123562 (-)
Type: TC
Location: 122447 - 123562 (-)
Gene ID: HRGMv2_1937_2_114
Type: pfam
Location: 123562 - 124938 (-)
Type: pfam
Location: 123562 - 124938 (-)
Gene ID: HRGMv2_1937_2_115
Type: TC
Location: 124959 - 125924 (-)
Type: TC
Location: 124959 - 125924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.