Cluster: HRGMv2_1937_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- CGC Family ID: CGCFAM_00854
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1937_1 | HRGMv2_1937_1_543 | 548058 | 549302 | + | GT2 |
| pfam | HRGMv2_1937_1 | HRGMv2_1937_1_544 | 549444 | 550250 | + | HTH_38 |
| TC | HRGMv2_1937_1 | HRGMv2_1937_1_545 | 550508 | 551236 | - | 3.A.1.3.25 |
| TC | HRGMv2_1937_1 | HRGMv2_1937_1_546 | 551217 | 551882 | - | 3.A.1.3.25 |
| TC | HRGMv2_1937_1 | HRGMv2_1937_1_547 | 551921 | 552700 | - | 3.A.1.3.25 |
Gene ID: HRGMv2_1937_1_543
Type: CAZyme
Location: 548058 - 549302 (+)
Type: CAZyme
Location: 548058 - 549302 (+)
Gene ID: HRGMv2_1937_1_544
Type: pfam
Location: 549444 - 550250 (+)
Type: pfam
Location: 549444 - 550250 (+)
Gene ID: HRGMv2_1937_1_545
Type: TC
Location: 550508 - 551236 (-)
Type: TC
Location: 550508 - 551236 (-)
Gene ID: HRGMv2_1937_1_546
Type: TC
Location: 551217 - 551882 (-)
Type: TC
Location: 551217 - 551882 (-)
Gene ID: HRGMv2_1937_1_547
Type: TC
Location: 551921 - 552700 (-)
Type: TC
Location: 551921 - 552700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.