Cluster: HRGMv2_1937_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1937
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1937_18 | HRGMv2_1937_18_2 | 1443 | 2132 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_1937_18 | HRGMv2_1937_18_3 | 2166 | 2945 | + | GT2 |
| pfam | HRGMv2_1937_18 | HRGMv2_1937_18_4 | 3037 | 4317 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_1937_18 | HRGMv2_1937_18_5 | 4318 | 5205 | + | GT11 |
Gene ID: HRGMv2_1937_18_2
Type: TC
Location: 1443 - 2132 (+)
Type: TC
Location: 1443 - 2132 (+)
Gene ID: HRGMv2_1937_18_3
Type: CAZyme
Location: 2166 - 2945 (+)
Type: CAZyme
Location: 2166 - 2945 (+)
Gene ID: HRGMv2_1937_18_4
Type: pfam
Location: 3037 - 4317 (+)
Type: pfam
Location: 3037 - 4317 (+)
Gene ID: HRGMv2_1937_18_5
Type: CAZyme
Location: 4318 - 5205 (+)
Type: CAZyme
Location: 4318 - 5205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.