Cluster: HRGMv2_1937_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1937
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1937_15 | HRGMv2_1937_15_2 | 158 | 1315 | + | GT4 |
| pfam | HRGMv2_1937_15 | HRGMv2_1937_15_3 | 1317 | 2630 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | HRGMv2_1937_15 | HRGMv2_1937_15_4 | 2948 | 4054 | + | EpsG |
| CAZyme | HRGMv2_1937_15 | HRGMv2_1937_15_5 | 4084 | 5145 | + | GT56 |
| TC | HRGMv2_1937_15 | HRGMv2_1937_15_6 | 5175 | 6647 | + | 2.A.66.2.23 |
Gene ID: HRGMv2_1937_15_2
Type: CAZyme
Location: 158 - 1315 (+)
Type: CAZyme
Location: 158 - 1315 (+)
Gene ID: HRGMv2_1937_15_3
Type: pfam
Location: 1317 - 2630 (+)
Type: pfam
Location: 1317 - 2630 (+)
Gene ID: HRGMv2_1937_15_4
Type: pfam
Location: 2948 - 4054 (+)
Type: pfam
Location: 2948 - 4054 (+)
Gene ID: HRGMv2_1937_15_5
Type: CAZyme
Location: 4084 - 5145 (+)
Type: CAZyme
Location: 4084 - 5145 (+)
Gene ID: HRGMv2_1937_15_6
Type: TC
Location: 5175 - 6647 (+)
Type: TC
Location: 5175 - 6647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.