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Cluster: HRGMv2_1937_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1937_1 HRGMv2_1937_1_270 256463 257167 - 3.A.1.4.10
TC HRGMv2_1937_1 HRGMv2_1937_1_271 257178 257936 - 3.A.1.4.10
TC HRGMv2_1937_1 HRGMv2_1937_1_272 257936 258943 - 3.A.1.4.10
TC HRGMv2_1937_1 HRGMv2_1937_1_273 258947 259822 - 3.A.1.4.10
TC HRGMv2_1937_1 HRGMv2_1937_1_274 259932 261098 - 3.A.1.4.10
STP HRGMv2_1937_1 HRGMv2_1937_1_275 261197 261838 - HhH-GPD
pfam HRGMv2_1937_1 HRGMv2_1937_1_276 261831 262193 - Cupin_1 | MannoseP_isomer | Cupin_3 | Cupin_2
CAZyme HRGMv2_1937_1 HRGMv2_1937_1_277 262214 264385 - GT51
Gene ID: HRGMv2_1937_1_270
Type: TC
Location: 256463 - 257167 (-)
Gene ID: HRGMv2_1937_1_271
Type: TC
Location: 257178 - 257936 (-)
Gene ID: HRGMv2_1937_1_272
Type: TC
Location: 257936 - 258943 (-)
Gene ID: HRGMv2_1937_1_273
Type: TC
Location: 258947 - 259822 (-)
Gene ID: HRGMv2_1937_1_274
Type: TC
Location: 259932 - 261098 (-)
Gene ID: HRGMv2_1937_1_275
Type: STP
Location: 261197 - 261838 (-)
Gene ID: HRGMv2_1937_1_276
Type: pfam
Location: 261831 - 262193 (-)
Gene ID: HRGMv2_1937_1_277
Type: CAZyme
Location: 262214 - 264385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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