Cluster: HRGMv2_1937_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1937_8 | HRGMv2_1937_8_115 | 112395 | 113666 | + | 5.A.1.2.1 |
| CAZyme | HRGMv2_1937_8 | HRGMv2_1937_8_116 | 113821 | 115263 | + | GH13_5 |
| TC | HRGMv2_1937_8 | HRGMv2_1937_8_117 | 115438 | 116247 | + | 2.A.5.5.2 |
| pfam | HRGMv2_1937_8 | HRGMv2_1937_8_118 | 116264 | 117091 | + | AP_endonuc_2 |
| TC | HRGMv2_1937_8 | HRGMv2_1937_8_119 | 117270 | 118196 | + | 2.A.4.7.2 |
Gene ID: HRGMv2_1937_8_115
Type: TC
Location: 112395 - 113666 (+)
Type: TC
Location: 112395 - 113666 (+)
Gene ID: HRGMv2_1937_8_116
Type: CAZyme
Location: 113821 - 115263 (+)
Type: CAZyme
Location: 113821 - 115263 (+)
Gene ID: HRGMv2_1937_8_117
Type: TC
Location: 115438 - 116247 (+)
Type: TC
Location: 115438 - 116247 (+)
Gene ID: HRGMv2_1937_8_118
Type: pfam
Location: 116264 - 117091 (+)
Type: pfam
Location: 116264 - 117091 (+)
Gene ID: HRGMv2_1937_8_119
Type: TC
Location: 117270 - 118196 (+)
Type: TC
Location: 117270 - 118196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.