Cluster: HRGMv2_1937_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- CGC Family ID: CGCFAM_04029
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1937_5 | HRGMv2_1937_5_20 | 19623 | 21584 | - | 3.A.1.134.12 |
| TC | HRGMv2_1937_5 | HRGMv2_1937_5_21 | 21594 | 22337 | - | 3.A.1.134.12 |
| pfam | HRGMv2_1937_5 | HRGMv2_1937_5_22 | 22517 | 23326 | + | NAD_binding_2 | F420_oxidored | P5CR_dimer |
| CAZyme | HRGMv2_1937_5 | HRGMv2_1937_5_23 | 23346 | 25967 | + | GH3 |
Gene ID: HRGMv2_1937_5_20
Type: TC
Location: 19623 - 21584 (-)
Type: TC
Location: 19623 - 21584 (-)
Gene ID: HRGMv2_1937_5_21
Type: TC
Location: 21594 - 22337 (-)
Type: TC
Location: 21594 - 22337 (-)
Gene ID: HRGMv2_1937_5_22
Type: pfam
Location: 22517 - 23326 (+)
Type: pfam
Location: 22517 - 23326 (+)
Gene ID: HRGMv2_1937_5_23
Type: CAZyme
Location: 23346 - 25967 (+)
Type: CAZyme
Location: 23346 - 25967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.