Cluster: HRGMv2_1937_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1937_4 | HRGMv2_1937_4_39 | 35655 | 36410 | - | 3.A.1.20.2 |
| pfam | HRGMv2_1937_4 | HRGMv2_1937_4_40 | 36626 | 38260 | + | PTPS_related |
| CAZyme | HRGMv2_1937_4 | HRGMv2_1937_4_41 | 38232 | 40043 | + | GT39 |
| pfam | HRGMv2_1937_4 | HRGMv2_1937_4_42 | 40097 | 40648 | + | PsiE |
| pfam | HRGMv2_1937_4 | HRGMv2_1937_4_43 | 40623 | 40997 | + | Ribonuc_L-PSP |
| TC | HRGMv2_1937_4 | HRGMv2_1937_4_44 | 41060 | 41998 | + | 2.A.4.7.4 |
Gene ID: HRGMv2_1937_4_39
Type: TC
Location: 35655 - 36410 (-)
Type: TC
Location: 35655 - 36410 (-)
Gene ID: HRGMv2_1937_4_40
Type: pfam
Location: 36626 - 38260 (+)
Type: pfam
Location: 36626 - 38260 (+)
Gene ID: HRGMv2_1937_4_41
Type: CAZyme
Location: 38232 - 40043 (+)
Type: CAZyme
Location: 38232 - 40043 (+)
Gene ID: HRGMv2_1937_4_42
Type: pfam
Location: 40097 - 40648 (+)
Type: pfam
Location: 40097 - 40648 (+)
Gene ID: HRGMv2_1937_4_43
Type: pfam
Location: 40623 - 40997 (+)
Type: pfam
Location: 40623 - 40997 (+)
Gene ID: HRGMv2_1937_4_44
Type: TC
Location: 41060 - 41998 (+)
Type: TC
Location: 41060 - 41998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.