Cluster: HRGMv2_1937_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1937
- CGC Family ID: CGCFAM_03823
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1937_2 | HRGMv2_1937_2_402 | 422828 | 423766 | - | GH25 |
| TC | HRGMv2_1937_2 | HRGMv2_1937_2_403 | 423769 | 424179 | - | 1.E.19.1.7 |
| CAZyme | HRGMv2_1937_2 | HRGMv2_1937_2_404 | 424240 | 426708 | - | GH18 |
Gene ID: HRGMv2_1937_2_402
Type: CAZyme
Location: 422828 - 423766 (-)
Type: CAZyme
Location: 422828 - 423766 (-)
Gene ID: HRGMv2_1937_2_403
Type: TC
Location: 423769 - 424179 (-)
Type: TC
Location: 423769 - 424179 (-)
Gene ID: HRGMv2_1937_2_404
Type: CAZyme
Location: 424240 - 426708 (-)
Type: CAZyme
Location: 424240 - 426708 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.