Cluster: HRGMv2_1937_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1937
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1937_2 | HRGMv2_1937_2_325 | 323899 | 325386 | - | 3.A.1.121.3 |
| pfam | HRGMv2_1937_2 | HRGMv2_1937_2_326 | 325824 | 326630 | - | Amidohydro_2 |
| pfam | HRGMv2_1937_2 | HRGMv2_1937_2_327 | 326782 | 327999 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_1937_2 | HRGMv2_1937_2_328 | 328128 | 329282 | + | 2.A.103.1.2 |
| NULL(UNKNOWN) | HRGMv2_1937_2 | HRGMv2_1937_2_329 | 329299 | 330426 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1937_2 | HRGMv2_1937_2_330 | 330423 | 331832 | - | AA4 |
Gene ID: HRGMv2_1937_2_325
Type: TC
Location: 323899 - 325386 (-)
Type: TC
Location: 323899 - 325386 (-)
Gene ID: HRGMv2_1937_2_326
Type: pfam
Location: 325824 - 326630 (-)
Type: pfam
Location: 325824 - 326630 (-)
Gene ID: HRGMv2_1937_2_327
Type: pfam
Location: 326782 - 327999 (+)
Type: pfam
Location: 326782 - 327999 (+)
Gene ID: HRGMv2_1937_2_328
Type: TC
Location: 328128 - 329282 (+)
Type: TC
Location: 328128 - 329282 (+)
Gene ID: HRGMv2_1937_2_329
Type:
Location: 329299 - 330426 (-)
Type:
Location: 329299 - 330426 (-)
Gene ID: HRGMv2_1937_2_330
Type: CAZyme
Location: 330423 - 331832 (-)
Type: CAZyme
Location: 330423 - 331832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium limosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.