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Cluster: HRGMv2_1937_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1937_2 HRGMv2_1937_2_220 222110 222463 - GT2
CAZyme HRGMv2_1937_2 HRGMv2_1937_2_221 222518 223597 - GT4
pfam HRGMv2_1937_2 HRGMv2_1937_2_222 223606 224643 - EpsG
CAZyme HRGMv2_1937_2 HRGMv2_1937_2_223 224650 225774 - GT4
CAZyme HRGMv2_1937_2 HRGMv2_1937_2_224 225813 226976 - GT4
pfam HRGMv2_1937_2 HRGMv2_1937_2_225 227002 227877 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_1937_2 HRGMv2_1937_2_226 227874 228494 - 9.B.18.1.3
Gene ID: HRGMv2_1937_2_220
Type: CAZyme
Location: 222110 - 222463 (-)
Gene ID: HRGMv2_1937_2_221
Type: CAZyme
Location: 222518 - 223597 (-)
Gene ID: HRGMv2_1937_2_222
Type: pfam
Location: 223606 - 224643 (-)
Gene ID: HRGMv2_1937_2_223
Type: CAZyme
Location: 224650 - 225774 (-)
Gene ID: HRGMv2_1937_2_224
Type: CAZyme
Location: 225813 - 226976 (-)
Gene ID: HRGMv2_1937_2_225
Type: pfam
Location: 227002 - 227877 (-)
Gene ID: HRGMv2_1937_2_226
Type: TC
Location: 227874 - 228494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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