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Cluster: HRGMv2_1936_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1936_6 HRGMv2_1936_6_20 16370 16600 - 3.D.1.6.4
TC HRGMv2_1936_6 HRGMv2_1936_6_21 16613 17152 - 3.A.1.25.5
pfam HRGMv2_1936_6 HRGMv2_1936_6_22 17393 17671 + Glutaredoxin | Glrx-like
pfam HRGMv2_1936_6 HRGMv2_1936_6_23 17671 18207 + His_Phos_1
CAZyme HRGMv2_1936_6 HRGMv2_1936_6_24 18281 19594 + GH32
NULL(UNKNOWN) HRGMv2_1936_6 HRGMv2_1936_6_25 19666 19770 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1936_6 HRGMv2_1936_6_26 19817 20575 + S6PP | Hydrolase_3
TC HRGMv2_1936_6 HRGMv2_1936_6_27 20584 22317 + 3.A.1.106.2
Gene ID: HRGMv2_1936_6_20
Type: TC
Location: 16370 - 16600 (-)
Gene ID: HRGMv2_1936_6_21
Type: TC
Location: 16613 - 17152 (-)
Gene ID: HRGMv2_1936_6_22
Type: pfam
Location: 17393 - 17671 (+)
Gene ID: HRGMv2_1936_6_23
Type: pfam
Location: 17671 - 18207 (+)
Gene ID: HRGMv2_1936_6_24
Type: CAZyme
Location: 18281 - 19594 (+)
Gene ID: HRGMv2_1936_6_25
Type:
Location: 19666 - 19770 (+)
Gene ID: HRGMv2_1936_6_26
Type: pfam
Location: 19817 - 20575 (+)
Gene ID: HRGMv2_1936_6_27
Type: TC
Location: 20584 - 22317 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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