Cluster: HRGMv2_1936_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1936
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1936_4 | HRGMv2_1936_4_1 | 139 | 2160 | - | GH42 |
| CAZyme | HRGMv2_1936_4 | HRGMv2_1936_4_2 | 2153 | 4369 | - | GH36 |
| pfam | HRGMv2_1936_4 | HRGMv2_1936_4_3 | 4372 | 4809 | - | DUF3284 |
| TC | HRGMv2_1936_4 | HRGMv2_1936_4_4 | 4819 | 6126 | - | 4.A.3.2.8 |
Gene ID: HRGMv2_1936_4_1
Type: CAZyme
Location: 139 - 2160 (-)
Type: CAZyme
Location: 139 - 2160 (-)
Gene ID: HRGMv2_1936_4_2
Type: CAZyme
Location: 2153 - 4369 (-)
Type: CAZyme
Location: 2153 - 4369 (-)
Gene ID: HRGMv2_1936_4_3
Type: pfam
Location: 4372 - 4809 (-)
Type: pfam
Location: 4372 - 4809 (-)
Gene ID: HRGMv2_1936_4_4
Type: TC
Location: 4819 - 6126 (-)
Type: TC
Location: 4819 - 6126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.