Cluster: HRGMv2_1936_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1936
- CGC Family ID: CGCFAM_03310
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1936_60 | HRGMv2_1936_60_2 | 1152 | 2159 | + | GT2 |
| CAZyme | HRGMv2_1936_60 | HRGMv2_1936_60_3 | 2170 | 3270 | + | GT4 |
| pfam | HRGMv2_1936_60 | HRGMv2_1936_60_4 | 3328 | 4248 | - | NTP_transferase |
| pfam | HRGMv2_1936_60 | HRGMv2_1936_60_5 | 4361 | 4645 | - | Dabb |
| TC | HRGMv2_1936_60 | HRGMv2_1936_60_6 | 4649 | 5440 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_1936_60_2
Type: CAZyme
Location: 1152 - 2159 (+)
Type: CAZyme
Location: 1152 - 2159 (+)
Gene ID: HRGMv2_1936_60_3
Type: CAZyme
Location: 2170 - 3270 (+)
Type: CAZyme
Location: 2170 - 3270 (+)
Gene ID: HRGMv2_1936_60_4
Type: pfam
Location: 3328 - 4248 (-)
Type: pfam
Location: 3328 - 4248 (-)
Gene ID: HRGMv2_1936_60_5
Type: pfam
Location: 4361 - 4645 (-)
Type: pfam
Location: 4361 - 4645 (-)
Gene ID: HRGMv2_1936_60_6
Type: TC
Location: 4649 - 5440 (-)
Type: TC
Location: 4649 - 5440 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.