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Cluster: HRGMv2_1936_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1936_43 HRGMv2_1936_43_15 12968 14647 - GH13_31
pfam HRGMv2_1936_43 HRGMv2_1936_43_16 14637 15059 - EIIA-man
TC HRGMv2_1936_43 HRGMv2_1936_43_17 15082 15903 - 4.A.6.1.13
TC HRGMv2_1936_43 HRGMv2_1936_43_18 15896 16693 - 4.A.6.1.13
TC HRGMv2_1936_43 HRGMv2_1936_43_19 16708 17184 - 4.A.6.1.16
NULL(UNKNOWN) HRGMv2_1936_43 HRGMv2_1936_43_20 17569 17901 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1936_43 HRGMv2_1936_43_21 18091 18447 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1936_43 HRGMv2_1936_43_22 18442 19038 - 3.A.1.134.6
Gene ID: HRGMv2_1936_43_15
Type: CAZyme
Location: 12968 - 14647 (-)
Gene ID: HRGMv2_1936_43_16
Type: pfam
Location: 14637 - 15059 (-)
Gene ID: HRGMv2_1936_43_17
Type: TC
Location: 15082 - 15903 (-)
Gene ID: HRGMv2_1936_43_18
Type: TC
Location: 15896 - 16693 (-)
Gene ID: HRGMv2_1936_43_19
Type: TC
Location: 16708 - 17184 (-)
Gene ID: HRGMv2_1936_43_20
Type:
Location: 17569 - 17901 (-)
Gene ID: HRGMv2_1936_43_21
Type:
Location: 18091 - 18447 (+)
Gene ID: HRGMv2_1936_43_22
Type: TC
Location: 18442 - 19038 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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