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Cluster: HRGMv2_1936_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1936_38 HRGMv2_1936_38_1 63 1895 - 4.A.1.2.11
CAZyme HRGMv2_1936_38 HRGMv2_1936_38_2 2157 3638 + GH1
TF HRGMv2_1936_38 HRGMv2_1936_38_3 3666 4625 - HTH_6
TC HRGMv2_1936_38 HRGMv2_1936_38_4 4643 5350 - 3.A.1.4.10
TC HRGMv2_1936_38 HRGMv2_1936_38_5 5353 6129 - 3.A.1.4.10
TC HRGMv2_1936_38 HRGMv2_1936_38_6 6131 7072 - 3.A.1.4.10
TC HRGMv2_1936_38 HRGMv2_1936_38_7 7076 7948 - 3.A.1.4.10
TC HRGMv2_1936_38 HRGMv2_1936_38_8 8010 9152 - 3.A.1.4.10
Gene ID: HRGMv2_1936_38_1
Type: TC
Location: 63 - 1895 (-)
Gene ID: HRGMv2_1936_38_2
Type: CAZyme
Location: 2157 - 3638 (+)
Gene ID: HRGMv2_1936_38_3
Type: TF
Location: 3666 - 4625 (-)
Gene ID: HRGMv2_1936_38_4
Type: TC
Location: 4643 - 5350 (-)
Gene ID: HRGMv2_1936_38_5
Type: TC
Location: 5353 - 6129 (-)
Gene ID: HRGMv2_1936_38_6
Type: TC
Location: 6131 - 7072 (-)
Gene ID: HRGMv2_1936_38_7
Type: TC
Location: 7076 - 7948 (-)
Gene ID: HRGMv2_1936_38_8
Type: TC
Location: 8010 - 9152 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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