Cluster: HRGMv2_1936_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1936
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1936_29 | HRGMv2_1936_29_6 | 4337 | 5710 | + | 2.A.66.1.32 |
| STP | HRGMv2_1936_29 | HRGMv2_1936_29_7 | 5679 | 6170 | + | Nitroreductase | Nitroreductase |
| CAZyme | HRGMv2_1936_29 | HRGMv2_1936_29_8 | 6194 | 8344 | - | GH16 |
Gene ID: HRGMv2_1936_29_6
Type: TC
Location: 4337 - 5710 (+)
Type: TC
Location: 4337 - 5710 (+)
Gene ID: HRGMv2_1936_29_7
Type: STP
Location: 5679 - 6170 (+)
Type: STP
Location: 5679 - 6170 (+)
Gene ID: HRGMv2_1936_29_8
Type: CAZyme
Location: 6194 - 8344 (-)
Type: CAZyme
Location: 6194 - 8344 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.