Cluster: HRGMv2_1936_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1936
- CGC Family ID: CGCFAM_09910
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1936_27 | HRGMv2_1936_27_2 | 566 | 1519 | - | 3.A.1.2.25 |
| NULL(UNKNOWN) | HRGMv2_1936_27 | HRGMv2_1936_27_3 | 1689 | 1889 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_1936_27 | HRGMv2_1936_27_4 | 1923 | 2108 | - | PspC |
| CAZyme | HRGMv2_1936_27 | HRGMv2_1936_27_5 | 2165 | 3073 | - | GT2 |
Gene ID: HRGMv2_1936_27_2
Type: TC
Location: 566 - 1519 (-)
Type: TC
Location: 566 - 1519 (-)
Gene ID: HRGMv2_1936_27_3
Type:
Location: 1689 - 1889 (+)
Type:
Location: 1689 - 1889 (+)
Gene ID: HRGMv2_1936_27_4
Type: TF
Location: 1923 - 2108 (-)
Type: TF
Location: 1923 - 2108 (-)
Gene ID: HRGMv2_1936_27_5
Type: CAZyme
Location: 2165 - 3073 (-)
Type: CAZyme
Location: 2165 - 3073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.