Cluster: HRGMv2_1936_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1936
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1936_25 | HRGMv2_1936_25_1 | 23 | 865 | - | 3.A.1.149.1 |
| TF | HRGMv2_1936_25 | HRGMv2_1936_25_2 | 852 | 1238 | - | GntR |
| CAZyme | HRGMv2_1936_25 | HRGMv2_1936_25_3 | 1393 | 2832 | + | GH1 |
Gene ID: HRGMv2_1936_25_1
Type: TC
Location: 23 - 865 (-)
Type: TC
Location: 23 - 865 (-)
Gene ID: HRGMv2_1936_25_2
Type: TF
Location: 852 - 1238 (-)
Type: TF
Location: 852 - 1238 (-)
Gene ID: HRGMv2_1936_25_3
Type: CAZyme
Location: 1393 - 2832 (+)
Type: CAZyme
Location: 1393 - 2832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1936_25_3 | vegan > omnivore | 1.61167 | 0.01489 |