Cluster: HRGMv2_1936_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1936
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1936_24 | HRGMv2_1936_24_6 | 5064 | 6152 | - | GT28 |
| pfam | HRGMv2_1936_24 | HRGMv2_1936_24_7 | 6162 | 7502 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1936_24 | HRGMv2_1936_24_8 | 7503 | 8471 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1936_24_6
Type: CAZyme
Location: 5064 - 6152 (-)
Type: CAZyme
Location: 5064 - 6152 (-)
Gene ID: HRGMv2_1936_24_7
Type: pfam
Location: 6162 - 7502 (-)
Type: pfam
Location: 6162 - 7502 (-)
Gene ID: HRGMv2_1936_24_8
Type: TC
Location: 7503 - 8471 (-)
Type: TC
Location: 7503 - 8471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.