Cluster: HRGMv2_1936_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1936
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1936_3 | HRGMv2_1936_3_78 | 78907 | 80193 | + | 4.A.3.2.9 |
| pfam | HRGMv2_1936_3 | HRGMv2_1936_3_79 | 80196 | 80936 | + | Hydrolase_3 |
| pfam | HRGMv2_1936_3 | HRGMv2_1936_3_80 | 80938 | 82416 | + | DUF4127 |
| CAZyme | HRGMv2_1936_3 | HRGMv2_1936_3_81 | 82413 | 83039 | + | CE3 |
| TF | HRGMv2_1936_3 | HRGMv2_1936_3_82 | 83020 | 83880 | + | HTH_6 |
| CAZyme | HRGMv2_1936_3 | HRGMv2_1936_3_83 | 83889 | 85262 | + | CE20 |
Gene ID: HRGMv2_1936_3_78
Type: TC
Location: 78907 - 80193 (+)
Type: TC
Location: 78907 - 80193 (+)
Gene ID: HRGMv2_1936_3_79
Type: pfam
Location: 80196 - 80936 (+)
Type: pfam
Location: 80196 - 80936 (+)
Gene ID: HRGMv2_1936_3_80
Type: pfam
Location: 80938 - 82416 (+)
Type: pfam
Location: 80938 - 82416 (+)
Gene ID: HRGMv2_1936_3_81
Type: CAZyme
Location: 82413 - 83039 (+)
Type: CAZyme
Location: 82413 - 83039 (+)
Gene ID: HRGMv2_1936_3_82
Type: TF
Location: 83020 - 83880 (+)
Type: TF
Location: 83020 - 83880 (+)
Gene ID: HRGMv2_1936_3_83
Type: CAZyme
Location: 83889 - 85262 (+)
Type: CAZyme
Location: 83889 - 85262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.