Cluster: HRGMv2_1934_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1934
- CGC Family ID: CGCFAM_08017
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1934_21 | HRGMv2_1934_21_19 | 21876 | 22598 | + | 3.A.1.6.7 |
| pfam | HRGMv2_1934_21 | HRGMv2_1934_21_20 | 22610 | 23533 | + | SUFBD_core |
| pfam | HRGMv2_1934_21 | HRGMv2_1934_21_21 | 23705 | 24907 | - | Flavodoxin_1 | Lactamase_B | ODP |
| CAZyme | HRGMv2_1934_21 | HRGMv2_1934_21_22 | 25141 | 26280 | + | CE9 |
Gene ID: HRGMv2_1934_21_19
Type: TC
Location: 21876 - 22598 (+)
Type: TC
Location: 21876 - 22598 (+)
Gene ID: HRGMv2_1934_21_20
Type: pfam
Location: 22610 - 23533 (+)
Type: pfam
Location: 22610 - 23533 (+)
Gene ID: HRGMv2_1934_21_21
Type: pfam
Location: 23705 - 24907 (-)
Type: pfam
Location: 23705 - 24907 (-)
Gene ID: HRGMv2_1934_21_22
Type: CAZyme
Location: 25141 - 26280 (+)
Type: CAZyme
Location: 25141 - 26280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Massilicoli
Species
Massilicoli timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.