Cluster: HRGMv2_1934_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1934
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1934_15 | HRGMv2_1934_15_11 | 7507 | 8217 | - | 1.A.14.2.2 |
| STP | HRGMv2_1934_15 | HRGMv2_1934_15_12 | 8385 | 9590 | - | PALP |
| STP | HRGMv2_1934_15 | HRGMv2_1934_15_13 | 9688 | 10743 | - | SIS | SIS |
| CAZyme | HRGMv2_1934_15 | HRGMv2_1934_15_14 | 10810 | 12117 | - | CE4 |
| sulfatase | HRGMv2_1934_15 | HRGMv2_1934_15_15 | 12244 | 14082 | + | S1_97 |
| TC | HRGMv2_1934_15 | HRGMv2_1934_15_16 | 14106 | 15923 | - | 3.A.1.111.2 |
| TC | HRGMv2_1934_15 | HRGMv2_1934_15_17 | 15920 | 17689 | - | 3.A.1.111.2 |
Gene ID: HRGMv2_1934_15_11
Type: TC
Location: 7507 - 8217 (-)
Type: TC
Location: 7507 - 8217 (-)
Gene ID: HRGMv2_1934_15_12
Type: STP
Location: 8385 - 9590 (-)
Type: STP
Location: 8385 - 9590 (-)
Gene ID: HRGMv2_1934_15_13
Type: STP
Location: 9688 - 10743 (-)
Type: STP
Location: 9688 - 10743 (-)
Gene ID: HRGMv2_1934_15_14
Type: CAZyme
Location: 10810 - 12117 (-)
Type: CAZyme
Location: 10810 - 12117 (-)
Gene ID: HRGMv2_1934_15_15
Type: sulfatase
Location: 12244 - 14082 (+)
Type: sulfatase
Location: 12244 - 14082 (+)
Gene ID: HRGMv2_1934_15_16
Type: TC
Location: 14106 - 15923 (-)
Type: TC
Location: 14106 - 15923 (-)
Gene ID: HRGMv2_1934_15_17
Type: TC
Location: 15920 - 17689 (-)
Type: TC
Location: 15920 - 17689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Massilicoli
Species
Massilicoli timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.