Cluster: HRGMv2_1934_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1934
- CGC Family ID: CGCFAM_00056
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1934_14 | HRGMv2_1934_14_3 | 1771 | 2835 | - | GH25 |
| STP | HRGMv2_1934_14 | HRGMv2_1934_14_4 | 2925 | 4322 | - | HATPase_c | HisKA |
| TF | HRGMv2_1934_14 | HRGMv2_1934_14_5 | 4319 | 4996 | - | Trans_reg_C |
| TC | HRGMv2_1934_14 | HRGMv2_1934_14_6 | 5093 | 6736 | - | 2.A.58.2.2 |
| TC | HRGMv2_1934_14 | HRGMv2_1934_14_7 | 6997 | 9573 | - | 3.A.1.122.13 |
Gene ID: HRGMv2_1934_14_3
Type: CAZyme
Location: 1771 - 2835 (-)
Type: CAZyme
Location: 1771 - 2835 (-)
Gene ID: HRGMv2_1934_14_4
Type: STP
Location: 2925 - 4322 (-)
Type: STP
Location: 2925 - 4322 (-)
Gene ID: HRGMv2_1934_14_5
Type: TF
Location: 4319 - 4996 (-)
Type: TF
Location: 4319 - 4996 (-)
Gene ID: HRGMv2_1934_14_6
Type: TC
Location: 5093 - 6736 (-)
Type: TC
Location: 5093 - 6736 (-)
Gene ID: HRGMv2_1934_14_7
Type: TC
Location: 6997 - 9573 (-)
Type: TC
Location: 6997 - 9573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Massilicoli
Species
Massilicoli timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.