Cluster: HRGMv2_1934_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_1934
- CGC Family ID: CGCFAM_00042
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1934_11 | HRGMv2_1934_11_44 | 38069 | 39475 | + | GH1 |
| TC | HRGMv2_1934_11 | HRGMv2_1934_11_45 | 39472 | 40776 | + | 4.A.3.2.6 |
| TC | HRGMv2_1934_11 | HRGMv2_1934_11_46 | 40789 | 41091 | + | 4.A.3.2.9 |
Gene ID: HRGMv2_1934_11_44
Type: CAZyme
Location: 38069 - 39475 (+)
Type: CAZyme
Location: 38069 - 39475 (+)
Gene ID: HRGMv2_1934_11_45
Type: TC
Location: 39472 - 40776 (+)
Type: TC
Location: 39472 - 40776 (+)
Gene ID: HRGMv2_1934_11_46
Type: TC
Location: 40789 - 41091 (+)
Type: TC
Location: 40789 - 41091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Massilicoli
Species
Massilicoli timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.