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Cluster: HRGMv2_1934_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1934_33 HRGMv2_1934_33_12 10748 12457 + 3.A.18.1.1
CAZyme HRGMv2_1934_33 HRGMv2_1934_33_13 12595 13599 + GT4
TC HRGMv2_1934_33 HRGMv2_1934_33_14 13622 14668 + 4.D.2.1.5
CAZyme HRGMv2_1934_33 HRGMv2_1934_33_15 14689 16680 + GT4
STP HRGMv2_1934_33 HRGMv2_1934_33_16 16664 17605 + HD
TC HRGMv2_1934_33 HRGMv2_1934_33_17 17773 19071 + 3.D.6.1.2
TC HRGMv2_1934_33 HRGMv2_1934_33_18 19084 20217 + 3.D.6.1.2
pfam HRGMv2_1934_33 HRGMv2_1934_33_19 20219 20725 + FMN_bind
TC HRGMv2_1934_33 HRGMv2_1934_33_20 20738 21424 + 3.D.6.1.2
TC HRGMv2_1934_33 HRGMv2_1934_33_21 21428 22003 + 3.D.6.1.2
TC HRGMv2_1934_33 HRGMv2_1934_33_22 22190 22498 + 3.D.6.1.4
Gene ID: HRGMv2_1934_33_12
Type: TC
Location: 10748 - 12457 (+)
Gene ID: HRGMv2_1934_33_13
Type: CAZyme
Location: 12595 - 13599 (+)
Gene ID: HRGMv2_1934_33_14
Type: TC
Location: 13622 - 14668 (+)
Gene ID: HRGMv2_1934_33_15
Type: CAZyme
Location: 14689 - 16680 (+)
Gene ID: HRGMv2_1934_33_16
Type: STP
Location: 16664 - 17605 (+)
Gene ID: HRGMv2_1934_33_17
Type: TC
Location: 17773 - 19071 (+)
Gene ID: HRGMv2_1934_33_18
Type: TC
Location: 19084 - 20217 (+)
Gene ID: HRGMv2_1934_33_19
Type: pfam
Location: 20219 - 20725 (+)
Gene ID: HRGMv2_1934_33_20
Type: TC
Location: 20738 - 21424 (+)
Gene ID: HRGMv2_1934_33_21
Type: TC
Location: 21428 - 22003 (+)
Gene ID: HRGMv2_1934_33_22
Type: TC
Location: 22190 - 22498 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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