Cluster: HRGMv2_1934_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1934
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1934_3 | HRGMv2_1934_3_61 | 70725 | 72230 | + | GH73 |
| pfam | HRGMv2_1934_3 | HRGMv2_1934_3_62 | 72232 | 72894 | + | Hydrolase | HAD_2 |
| TC | HRGMv2_1934_3 | HRGMv2_1934_3_63 | 73344 | 74696 | - | 2.A.66.1.28 |
| pfam | HRGMv2_1934_3 | HRGMv2_1934_3_64 | 75110 | 75463 | + | ArsC |
| TC | HRGMv2_1934_3 | HRGMv2_1934_3_65 | 75497 | 77290 | - | 3.A.16.1.2 |
Gene ID: HRGMv2_1934_3_61
Type: CAZyme
Location: 70725 - 72230 (+)
Type: CAZyme
Location: 70725 - 72230 (+)
Gene ID: HRGMv2_1934_3_62
Type: pfam
Location: 72232 - 72894 (+)
Type: pfam
Location: 72232 - 72894 (+)
Gene ID: HRGMv2_1934_3_63
Type: TC
Location: 73344 - 74696 (-)
Type: TC
Location: 73344 - 74696 (-)
Gene ID: HRGMv2_1934_3_64
Type: pfam
Location: 75110 - 75463 (+)
Type: pfam
Location: 75110 - 75463 (+)
Gene ID: HRGMv2_1934_3_65
Type: TC
Location: 75497 - 77290 (-)
Type: TC
Location: 75497 - 77290 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Massilicoli
Species
Massilicoli timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.